API Reference

This page contains auto-generated API reference documentation [1].

• lineage
  • lineage.Analyze
  • lineage.BaumWelch
  • lineage.CellVar
  • lineage.HMM
    • lineage.HMM.E_step
    • lineage.HMM.M_step
  • lineage.LineageInputOutput
  • lineage.LineageTree
  • lineage.Lineage_collections
  • lineage.Viterbi
  • lineage.compare_emissions
  • lineage.crossval
  • lineage.export_states
  • lineage.import_lineage
  • lineage.plotTree
  • lineage.states
    • lineage.states.StateDistributionCR
    • lineage.states.StateDistributionGaPhs
    • lineage.states.StateDistributionGamma
    • lineage.states.stateCommon
  • lineage.tHMM
  • lineage.tests
    • lineage.tests.conftest

[1]

Created with sphinx-autoapi