lineage.export_states
=====================

.. py:module:: lineage.export_states

.. autoapi-nested-parse::

   This file exports excel sheets of lineages of cells with their states assigned to them after fitting.



Functions
---------

.. autoapisummary::

   lineage.export_states.assign_states
   lineage.export_states.deintegrate
   lineage.export_states.write_onExcel


Module Contents
---------------

.. py:function:: assign_states(input_X)

   Given a list of lineages, it returns a 2D array of cell states in the form of a tree that will then be written into excel sheets.
   :param input_X: list of lineages.


.. py:function:: deintegrate(population, len_condition, gem=False)

   Given the tHMMobj.X and the array that holds lengths of excel sheets for a condition, it returns a list including lineages corresponding to each excel sheet.


.. py:function:: write_onExcel(lapt_tHMMobj_list, len_lp_cntr, len_lp_25, len_lp_50, len_lp_250, conc1, conc2, conc3, gem=False)

   Write cell states with the pattern of input data (in a binary format) to excel sheets.