References ========== If you use RISE in your research, please cite the following papers: RISE Paper ---------- Integrative, high-resolution analysis of single-cell gene expression across experimental conditions with PARAFAC2-RISE. *Cell Systems*, 2025. DOI: `10.1016/j.cels.2025.101294 `_ PARAFAC2 and Factor Match Score -------------------------------- RISE is built upon the PARAFAC2 tensor decomposition framework, which allows factor matrices in one mode to change across slices while maintaining a constant cross-product constraint. Factor Match Score (FMS) is used to assess the stability and reproducibility of tensor decomposition results across different runs. Roald, M., Schenker, C., Calhoun, V.D., Adali, T., Bro, R., Cohen, J.E., & Acar, E. (2022). An AO-ADMM approach to constraining PARAFAC2 on all modes. *SIAM Journal on Mathematics of Data Science*, 4(3), 1191-1222. DOI: `10.1137/21M1450033 `_